miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Medicago truncatula



ABOUT THIS RECORD

ID: MNEST008357
species: Medicago truncatula
miRNA family: MIR2673
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCTCTTCCTCTTCCTCTTCCT

miRNA*
GAAGAGGACGATGAAGATGAG

mismatches: 4
bulges: 0

View larger
pre-miRNA
GGGGNNGAGGAATANAAGAAGANACAGAAGAGGAGAGACAACCGCAGGAACAGAACAGTGACGAAGAGGACGATGAAGATGAGAAAGAACTTTTCAATGG
CAGTCGAATTCACGACCTAAATGCTTCACCAACCCTCAACAAGATTCATCGAGCTTCGGTCACGTACCAACGACGACCTCCCTCTCGAGGTAACTGGTCA
AGAATCCAATCAGTTCAACCAAGAGAAAGGCCTTCCATGACTAACCCACTCCCGCCTGGTGAGGATCCGCAATCACCAGCTGCTCCAAGAAAACAAACCA
TGTCACCAATGGCAGGAGGACCGATGCCTGGACTTGGTGCTTTTGACCCAACCGCCGTTAAACTTAAAGCGGCTCACCGGCCAACCGTCACCGGCGCCAC
CGCCACTCCTCCTGCTGGCGTCTTTGTTGCACCACAACTGAGGAAAGTGAACCGAGAGGAGAGGTCTGGAAGCGCCGTCGCATTGACCTTCAACAACAAC
AACGTTCCTCCTCAAGAAAGAATTCCTCAACCATCTCCTCTTGAAAAAAGGCGCTCTGCAGAACTTCCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTT
CCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCG


dot-bracket secondary structure
((((..((((((.....(((((....(((((((((((........(((((.((((.((.((.((((((((.((.(((((.(((...(((.((((((..((
((((((......)))).....))))((((((..............((((.((((((.((((.(((....)))..))))....((((..((((((((((..
........)))))))..)))..)))).))))..)).))))................))))))(((...(((.........))))))..((..........
..))......((((((((((..((((..(((...(((((...(((...)))..((((((........)))))).))))).)))..))))...((((....
))))..))))))))))(((((((((((((.....)))).((((((.((..........((.(((((.....(((....)))...))))))).........
.)).)))))).((((((.(((............)))..))))))..))))))))).)).)))).))).))).))))).)).)))))))).))...)).))
.)).)))))....))).)))))))).)))))...))))))..))))....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record





Liczniki na strone;